tm-align
structural alignment of proteins
Command lineScience
Not tested on a device yet. What that means
Commands in the package
TMalignTMscore
About tm-align
From Debian's package description
TM-align is a computer algorithm for protein structure alignment using dynamic programming. The scoring is performed by the TM-score rotation matrix. This is similar to the RMSD in that unaligned portions of the structure influence the scoring less than the more structurally conserved regions.
From Debian's description of the tm-align package, under that package's license.
Dependencies
Depends on
libc6libgfortran5
On x86-64 it also needs libgcc-s1.
Related apps
- fsaFast Statistical Alignment of protein, RNA or DNA sequencesCommand line
- muscleMultiple alignment program of protein sequencesCommand line
- clustaloGeneral-purpose multiple sequence alignment program for proteinsCommand line
- prodamultiple alignment of protein sequencesCommand line
- mustangmultiple structural alignment of proteinsCommand line
- hhsuitesensitive protein sequence searching based on HMM-HMM alignmentCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the tm-align package, under that package's license.
- Description: Debian's description of the tm-align package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.