unifrac-tools
high-performance phylogenetic diversity calculations (binaries)
Command lineScience
Not tested on a device yet. What that means
Commands in the package
faithpdssu
About unifrac-tools
From Debian's package description
The de facto repository for high-performance phylogenetic diversity calculations. The methods in this repository are based on an implementation of the Strided State UniFrac algorithm which is faster, and uses less memory than Fast UniFrac. Strided State UniFrac supports Unweighted UniFrac, Weighted UniFrac, Generalized UniFrac, Variance Adjusted UniFrac and meta UniFrac. This repository also includes Stacked Faith (manuscript in preparation), a method for calculating Faith's PD that is faster and uses less memory than the Fast UniFrac-based reference implementation.
This package contains target binaries ssu and faithpd
From Debian's description of the unifrac-tools package, under that package's license.
Dependencies
Depends on
libblas3orlibblas.so.3libc6libcurl4t64libgcc-s1libgomp1liblapackeliblz4-1libssl3t64libstdc++6libsz2zlib1glibssu0
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Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the unifrac-tools package, under that package's license.
- Description: Debian's description of the unifrac-tools package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.