busco
benchmarking sets of universal single-copy orthologs
Command lineScience
Not tested on a device yet. What that means
Commands in the package
busco
About busco
From Debian's package description
Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs (BUSCO).
- Automated selection of lineages issued from https://www.orthodb.org/
- Automated download of all necessary files and datasets to conduct a run
- Use prodigal for non-eukaryotic genomes
From Debian's description of the busco package, under that package's license.
Dependencies
Depends on
Related apps
- ministatsimple tool for statistical comparison of data setsCommand line
- jubeJUBE Benchmarking EnvironmentCommand line
- bmtsoftware analysis benchmarking toolkitCommand line
- reapruniversal tool for genome assembly evaluationCommand line
- sra-toolkitutilities for the NCBI Sequence Read ArchiveCommand line
- cnvkitCopy number variant detection from targeted DNA sequencingCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the busco package, under that package's license.
- Description: Debian's description of the busco package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.