cif-tools
Suite of tools to manipulate, validate and query mmCIF files
Command lineScience
Not tested on a device yet. What that means
Commands in the package
cif-diffcif-grepcif-mergecif-validatecif2pdbmmCQLpdb2cif
About cif-tools
From Debian's package description
This package contains a suite of tools for the manipulation of mmCIF files.
The structure of macro molecules is nowadays recorded in mmCIF files. Until recently however the ancient PDB file format was used by many programs but that format has since long been deprecated.
This package provides two tools, pdb2cif and cif2pdb, that can convert files from one format into the other, provided that data fits of course.
Other tools are cif-validate, cif-grep, cif-diff, cif-merge and mmCQL. The latter can be used to manipulate an mmCIF file as if it were a SQL like database using SELECT, UPDATE, INSERT and DELETE commands.
This package depends on libcifpp.
From Debian's description of the cif-tools package, under that package's license.
Dependencies
Depends on
libc6libcifpp7libgcc-s1libstdc++6zlib1g
Related apps
- gdal-binGeospatial Data Abstraction Library - Utility programsCommand line
- gria language for scientific illustrationCommand line
- vcftoolsCollection of tools to work with VCF filesCommand line
- sra-toolkitutilities for the NCBI Sequence Read ArchiveCommand line
fv FITS EditorView and manipulate FITS-format files- picard-toolsCommand line tools to manipulate SAM and BAM filesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the cif-tools package, under that package's license.
- Description: Debian's description of the cif-tools package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.