embassy-domalign
Extra EMBOSS commands for protein domain alignment
Command lineScience
Not tested on a device yet. What that means
Commands in the package
allversusalldomainaligndomainrepseqalign
About embassy-domalign
From Debian's package description
The DOMALIGN programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.
Applications in the current domalign release are allversusall (sequence similarity data from all-versus-all comparison), domainalign (generates alignments (DAF file) for nodes in a DCF file), domainrep (reorders DCF file to identify representative structures) and seqalign (extend alignments (DAF file) with sequences (DHF file)).
From Debian's description of the embassy-domalign package, under that package's license.
Dependencies
Depends on
emboss-liblibc6libx11-6emboss-lib
Recommends
Related apps
- muscleMultiple alignment program of protein sequencesCommand line
- clustaloGeneral-purpose multiple sequence alignment program for proteinsCommand line
- prodamultiple alignment of protein sequencesCommand line
- mustangmultiple structural alignment of proteinsCommand line
- tm-alignstructural alignment of proteinsCommand line
- hhsuitesensitive protein sequence searching based on HMM-HMM alignmentCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the embassy-domalign package, under that package's license.
- Description: Debian's description of the embassy-domalign package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.