ipig
integrating PSMs into genome browser visualisations
Command lineScience
Not tested on a device yet. What that means
Commands in the package
ipig
About ipig
From Debian's package description
iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/).
iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers.
From Debian's description of the ipig package, under that package's license.
Dependencies
Depends on
libcommons-compress-javalibcommons-net-javalibjdom1-javalibxerces2-java
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Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the ipig package, under that package's license.
- Description: Debian's description of the ipig package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.