kineticstools
detection of DNA modifications
Command lineScience
Not tested on a device yet. What that means
Commands in the package
ipdSummarysummarizeModifications
About kineticstools
From Debian's package description
Tools for detecting DNA modifications from single molecule, real-time (SMRT®) sequencing data. This tool implements the P_ModificationDetection module in SMRT® Portal, used by the RS_Modification_Detection and RS_Modifications_and_Motif_Detection protocol. Researchers interested in understanding or extending the modification detection algorithms can use these tools as a starting point.
This package is part of the SMRTAnalysis suite.
From Debian's description of the kineticstools package, under that package's license.
Dependencies
Depends on
python3python3-kineticstools
Related apps
- cnvkitCopy number variant detection from targeted DNA sequencingCommand line
- surpyvormodification of VCF files with SURVIVORCommand line
- xporeNanopore analysis of differential RNA modificationsCommand line
- phyutilitysimple analyses or modifications on both phylogenetic trees and data matricesCommand line
- wigeonreimplementation of the Pintail 16S DNA anomaly detection utilityCommand line
- macsyfinderdetection of macromolecular systems in protein datasetsCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the kineticstools package, under that package's license.
- Description: Debian's description of the kineticstools package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.