ncbi-blast+

next generation suite of BLAST sequence search tools

Command lineScience

Not tested on a device yet. What that means

Commands in the package

blast_formatter
blast_formatter_vdb
blast_vdb_cmd
blastdb_aliastool
blastdb_convert
blastdb_path
blastdbcheck
blastdbcmd
blastdbcp
blastn
blastn_vdb
blastp
blastx
cleanup-blastdb-volumes
convert2blastmask
deltablast
dustmasker
gene_info_reader
get_species_taxids
legacy_blast
makeblastdb
makeclusterdb
makembindex
makeprofiledb
psiblast
rpsblast+
rpstblastn
seedtop+
segmasker
seqdb_perf
tax4blast
tblastn
tblastn_vdb
tblastx
update_blastdb
windowmasker
windowmasker_2.2.22_adapter

About ncbi-blast+

From Debian's package description

The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as a network service.

From Debian's description of the ncbi-blast+ package, under that package's license.

Dependencies

Depends on

ncbi-data
python3
perl
libbz2-1.0
libc6
libgcc-s1
libgomp1
liblmdb0
libmbedcrypto16
libmbedtls21
libmbedx509-7
libncbi-vdb3
libnghttp2-14
libpcre2-8-0
libsqlite3-0
libstdc++6
libuv1t64
libzstd1
zlib1g

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cclibParsers and algorithms for computational chemistryCommand line

All Linux science apps

Sources and licenses

Name: the Debian package name.
Summary: Debian's short description of the ncbi-blast+ package, under that package's license.
Description: Debian's description of the ncbi-blast+ package, under that package's license.
Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
Popularity: Debian Popularity Contest counts.