sumaclust
fast and exact clustering of genomic sequences
Command lineScience
Not tested on a device yet. What that means
Commands in the package
sumaclust
About sumaclust
From Debian's package description
With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumaclust is a program developed by the LECA. Sumaclust aims to cluster sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumaclust clusters sequences using the same clustering algorithm as UCLUST and CD- HIT. This algorithm is mainly useful to detect the 'erroneous' sequences created during amplification and sequencing protocols, deriving from 'true' sequences.
From Debian's description of the sumaclust package, under that package's license.
Dependencies
Depends on
libc6libgomp1libsuma1
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Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the sumaclust package, under that package's license.
- Description: Debian's description of the sumaclust package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
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