clustalw
global multiple nucleotide or peptide sequence alignment
Command lineScience
Not tested on a device yet. What that means
Commands in the package
clustalw
About clustalw
From Debian's package description
This program performs an alignment of multiple nucleotide or amino acid sequences. It recognizes the format of input sequences and whether the sequences are nucleic acid (DNA/RNA) or amino acid (proteins). The output format may be selected from in various formats for multiple alignments such as Phylip or FASTA. Clustal W is very well accepted.
The output of Clustal W can be edited manually but preferably with an alignment editor like SeaView or within its companion Clustal X. When building a model from your alignment, this can be applied for improved database searches. The Debian package hmmer creates such in form of an HMM.
From Debian's description of the clustalw package, under that package's license.
Dependencies
Depends on
libc6libgcc-s1libstdc++6
Related apps
- mummerEfficient sequence alignment of full genomesCommand line
- fsaFast Statistical Alignment of protein, RNA or DNA sequencesCommand line
- samtoolsprocessing sequence alignments in SAM, BAM and CRAM formatsCommand line
- muscleMultiple alignment program of protein sequencesCommand line
- clustaloGeneral-purpose multiple sequence alignment program for proteinsCommand line
- mafftMultiple alignment program for amino acid or nucleotide sequencesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the clustalw package, under that package's license.
- Description: Debian's description of the clustalw package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.