gffread
GFF/GTF format conversions, region filtering, FASTA sequence extraction
Command lineScience
Not tested on a device yet. What that means
Commands in the package
gffread
About gffread
From Debian's package description
Gffread is a GFF/GTF parsing utility providing format conversions, region filtering, FASTA sequence extraction and more.
From Debian's description of the gffread package, under that package's license.
Dependencies
Depends on
libc6libgclib3libstdc++6
Related apps
- avce00Conversion of ESRI Arcinfo Vector Coverage in E00 formatCommand line
- ncbi-entrez-directNCBI Entrez utilities on the command lineCommand line
SeaViewEdits multiple sequence alignments and prints them in PostScript format.- seqtkFast and lightweight tool for processing sequences in the FASTA or FASTQ formatCommand line
- hhsuitesensitive protein sequence searching based on HMM-HMM alignmentCommand line
- rsemRNA-Seq by Expectation-MaximizationCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the gffread package, under that package's license.
- Description: Debian's description of the gffread package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.