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gwama

Genome-Wide Association Meta Analysis

Command lineScience

Install

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Commands in the package

  • GWAMA

About gwama

From Debian's package description

GWAMA (Genome-Wide Association Meta Analysis) software performs meta-analysis of the results of GWA studies of binary or quantitative phenotypes. Fixed- and random-effect meta-analyses are performed for both directly genotyped and imputed SNPs using estimates of the allelic odds ratio and 95% confidence interval for binary traits, and estimates of the allelic effect size and standard error for quantitative phenotypes. GWAMA can be used for analysing the results of all different genetic models (multiplicative, additive, dominant, recessive). The software incorporates error trapping facilities to identify strand alignment errors and allele flipping, and performs tests of heterogeneity of effects between studies.

From Debian's description of the gwama package, under that package's license.

Dependencies

Depends on

  • libc6
  • libgcc-s1
  • libstdc++6
  • zlib1g

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Sources and licenses

  • Name: the Debian package name.
  • Summary: Debian's short description of the gwama package, under that package's license.
  • Description: Debian's description of the gwama package, under that package's license.
  • Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
  • Popularity: Debian Popularity Contest counts.

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