seqan-apps

C++ library for the analysis of biological sequences

Command lineScience

Not tested on a device yet. What that means

Commands in the package

alf
gustaf
insegt
mason_frag_sequencing
mason_genome
mason_materializer
mason_methylation
micro_razers
pair_align
rabema_build_gold_standard
rabema_evaluate
rabema_prepare_sam
razers
razers3
sak
seqan_tcoffee
snp_store
splazers
stellar
tree_recon
yara_indexer
yara_mapper

About seqan-apps

From Debian's package description

SeqAn is a C++ template library of efficient algorithms and data structures for the analysis of sequences with the focus on biological data. This library applies a unique generic design that guarantees high performance, generality, extensibility, and integration with other libraries. SeqAn is easy to use and simplifies the development of new software tools with a minimal loss of performance. This package contains the applications dfi, pair_align, micro_razers, seqan_tcoffee, seqcons, razers and tree_recon.

From Debian's description of the seqan-apps package, under that package's license.

Dependencies

Depends on

libbz2-1.0
libc6
libgcc-s1
libgomp1
libstdc++6
zlib1g

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bowtie2ultrafast memory-efficient short read alignerCommand line
bowtieUltrafast memory-efficient short read alignerCommand line

All Linux science apps

Sources and licenses

Name: the Debian package name.
Summary: Debian's short description of the seqan-apps package, under that package's license.
Description: Debian's description of the seqan-apps package, under that package's license.
Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
Popularity: Debian Popularity Contest counts.