kalign
Global and progressive multiple sequence alignment
Command lineScience
Not tested on a device yet. What that means
Commands in the package
kalignkalignfmt
About kalign
From Debian's package description
Kalign is a command line tool to perform multiple alignment of biological sequences. It employs the Muth-Manber string-matching algorithm, to improve both the accuracy and speed of the alignment. It uses global, progressive alignment approach, enriched by employing an approximate string-matching algorithm to calculate sequence distances and by incorporating local matches into the otherwise global alignment.
From Debian's description of the kalign package, under that package's license.
Dependencies
Depends on
libc6libgomp1
Related apps
- mummerEfficient sequence alignment of full genomesCommand line
- fsaFast Statistical Alignment of protein, RNA or DNA sequencesCommand line
- samtoolsprocessing sequence alignments in SAM, BAM and CRAM formatsCommand line
- muscleMultiple alignment program of protein sequencesCommand line
- clustaloGeneral-purpose multiple sequence alignment program for proteinsCommand line
- mafftMultiple alignment program for amino acid or nucleotide sequencesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the kalign package, under that package's license.
- Description: Debian's description of the kalign package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.