loki
MCMC linkage analysis on general pedigrees
Command lineScience
Not tested on a device yet. What that means
Commands in the package
lokihistloki_countloki_distloki_extloki_freqloki_sort_errorprepqavg
About loki
From Debian's package description
Performs Markov chain Monte Carlo multipoint linkage analysis on large, complex pedigrees. The current package supports analyses on quantitative traits only, although this restriction will be lifted in later versions. Joint estimation of QTL number, position and effects uses Reversible Jump MCMC. It is also possible to perform affected only IBD sharing analyses.
From Debian's description of the loki package, under that package's license.
Dependencies
Depends on
libc6
Related apps
- jagsJust Another Gibbs Sampler for Bayesian MCMC - binaryCommand line
- vcftoolsCollection of tools to work with VCF filesCommand line
- sra-toolkitutilities for the NCBI Sequence Read ArchiveCommand line
- bioperlPerl tools for computational molecular biologyCommand line
- ncbi-entrez-directNCBI Entrez utilities on the command lineCommand line
- gnuastroGNU Astronomy Utilities programsCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the loki package, under that package's license.
- Description: Debian's description of the loki package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.