probcons
PROBabilistic CONSistency-based multiple sequence alignment
Command lineScience
Not tested on a device yet. What that means
Commands in the package
probconsprobcons-RNA
About probcons
From Debian's package description
Tool for generating multiple alignments of protein sequences. Using a combination of probabilistic modeling and consistency-based alignment techniques, PROBCONS has achieved the highest accuracies of all alignment methods to date. On the BAliBASE benchmark alignment database, alignments produced by PROBCONS show statistically significant improvement over current programs, containing an average of 7% more correctly aligned columns than those of T-Coffee, 11% more correctly aligned columns than those of CLUSTAL W, and 14% more correctly aligned columns than those of DIALIGN.
From Debian's description of the probcons package, under that package's license.
Dependencies
Depends on
libc6libgcc-s1libstdc++6
Related apps
- probcons-extraExtra programs from the probcons packageCommand line
- mummerEfficient sequence alignment of full genomesCommand line
- fsaFast Statistical Alignment of protein, RNA or DNA sequencesCommand line
- samtoolsprocessing sequence alignments in SAM, BAM and CRAM formatsCommand line
- muscleMultiple alignment program of protein sequencesCommand line
- clustaloGeneral-purpose multiple sequence alignment program for proteinsCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the probcons package, under that package's license.
- Description: Debian's description of the probcons package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.