relion

toolkit for 3D reconstructions in cryo-electron microscopy

Command lineScience

Install

Not tested on a device yet. What that means

Commands in the package

relion_align_symmetry
relion_autopick
relion_autopick_mpi
relion_convert_star
relion_convert_to_tiff
relion_convert_to_tiff_mpi
relion_ctf_mask_test
relion_ctf_refine
relion_ctf_refine_mpi
relion_ctf_toolbox
relion_demodulate
relion_estimate_gain
relion_external_reconstruct
relion_find_tiltpairs
relion_flex_analyse
relion_flex_analyse_mpi
relion_helix_inimodel2d
relion_helix_toolbox
relion_image_handler
relion_import
relion_localsym
relion_localsym_mpi
relion_mask_create
relion_merge_particles
relion_motion_refine
relion_motion_refine_mpi
relion_mrc2vtk
relion_particle_FCC
relion_particle_reposition
relion_particle_select
relion_particle_subtract
relion_particle_subtract_mpi
relion_particle_symmetry_expand
relion_pipeliner
relion_plot_delocalisation
relion_postprocess
relion_postprocess_mpi
relion_prepare_subtomo
relion_preprocess
relion_preprocess_mpi

And 21 more.

About relion

From Debian's package description

RELION (for REgularised LIkelihood OptimisatioN) is a stand-alone computer program for Maximum A Posteriori refinement of (multiple) 3D reconstructions or 2D class averages in cryo-electron microscopy.
RELION provides a GUI, several command-line tools in parallel (MPI) and serial versions, optionally with CUDA/GPU support.
relion provides the serial and parallel (MPI) command-line tools without CUDA/GPU support.

From Debian's description of the relion package, under that package's license.

Dependencies

Depends on

mpi-default-bin
libc6
libfftw3-double3
libfftw3-single3
libgcc-s1
libgomp1
libopenmpi40
libstdc++6
libtiff6

Related apps

relion-guitoolkit for 3D reconstructions in cryo-electron microscopy (gui apps)Command line
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hdf5-toolsHDF5 - Runtime toolsCommand line
ncbi-blast+next generation suite of BLAST sequence search toolsCommand line
gbrowseGMOD Generic Genome BrowserCommand line
dolfin-binExecutable scripts for DOLFINCommand line

All Linux science apps

Sources and licenses

Name: the Debian package name.
Summary: Debian's short description of the relion package, under that package's license.
Description: Debian's description of the relion package, under that package's license.
Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
Popularity: Debian Popularity Contest counts.