saint
Significance Analysis of INTeractome
Command lineScience
Not tested on a device yet. What that means
Commands in the package
saint-int-ctrlsaint-reformatsaint-spc-ctrlsaint-spc-noctrlsaint-spc-noctrl-matrix
About saint
From Debian's package description
SAINT implements the scoring algorithm for protein-protein interaction data using label free quantitative proteomics data in AP-MS experiments. It was used for spectral count data in the yeast kinase interactome work not incorporating control purification, as well as a generalized implementation for spectral count data with and without control purification.
Alternatively, you can also run SAINT in combination with ProHits.
The package was written for either doing analysis without or with control IPs and
From Debian's description of the saint package, under that package's license.
Dependencies
Depends on
libc6libgsl28
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Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the saint package, under that package's license.
- Description: Debian's description of the saint package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.