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swarm

robust and fast clustering method for amplicon-based studies

Command lineScience

Install

Not tested on a device yet. What that means

Commands in the package

  • swarm

About swarm

From Debian's package description

The purpose of swarm is to provide a novel clustering algorithm to handle large sets of amplicons. Traditional clustering algorithms results are strongly input-order dependent, and rely on an arbitrary global clustering threshold. swarm results are resilient to input-order changes and rely on a small local linking threshold d, the maximum number of differences between two amplicons. swarm forms stable high-resolution clusters, with a high yield of biological information.

From Debian's description of the swarm package, under that package's license.

Dependencies

Depends on

  • libc6
  • libgcc-s1
  • libstdc++6

Recommends

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Sources and licenses

  • Name: the Debian package name.
  • Summary: Debian's short description of the swarm package, under that package's license.
  • Description: Debian's description of the swarm package, under that package's license.
  • Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
  • Popularity: Debian Popularity Contest counts.

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