cdbfasta
Constant DataBase indexing and retrieval tools for multi-FASTA files
Command lineScience
Not tested on a device yet. What that means
Commands in the package
cdbfastacdbyank
About cdbfasta
From Debian's package description
CDB (Constant DataBase) can be used for creating indices for quick retrieval of any particular sequences from large multi-FASTA files. It has the option to compress data records in order to save space.
From Debian's description of the cdbfasta package, under that package's license.
Dependencies
Depends on
libc6libgclib3libstdc++6zlib1g
Related apps
- piCompute Archimedes' constant Pi to arbitrary precisionCommand line
- seqkitcross-platform and ultrafast toolkit for FASTA/Q file manipulationCommand line
- fastaqFASTA and FASTQ file manipulation toolsCommand line
- hhsuitesensitive protein sequence searching based on HMM-HMM alignmentCommand line
- pyfastxfast random access to sequences from FASTA/Q file - commandCommand line
- assembly-statsget assembly statistics from FASTA and FASTQ filesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the cdbfasta package, under that package's license.
- Description: Debian's description of the cdbfasta package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.