fastaq
FASTA and FASTQ file manipulation tools
Command lineScience
Not tested on a device yet. What that means
Commands in the package
fastaq
About fastaq
From Debian's package description
Fastaq represents a diverse collection of scripts that perform useful and common FASTA/FASTQ manipulation tasks, such as filtering, merging, splitting, sorting, trimming, search/replace, etc. Input and output files can be gzipped (format is automatically detected) and individual Fastaq commands can be piped together.
From Debian's description of the fastaq package, under that package's license.
Dependencies
Depends on
Related apps
- bcftoolsgenomic variant calling and manipulation of VCF/BCF filesCommand line
- seqkitcross-platform and ultrafast toolkit for FASTA/Q file manipulationCommand line
- seqtkFast and lightweight tool for processing sequences in the FASTA or FASTQ formatCommand line
- staden-io-lib-utilsprograms for manipulating DNA sequencing filesCommand line
- bamkittools for common BAM file manipulationsCommand line
- last-aligngenome-scale comparison of biological sequencesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the fastaq package, under that package's license.
- Description: Debian's description of the fastaq package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.