seqkit
cross-platform and ultrafast toolkit for FASTA/Q file manipulation
Command lineScience
Not tested on a device yet. What that means
Commands in the package
seqkitseqkit-benchmark
About seqkit
From Debian's package description
SeqKit describes a cross-platform ultrafast comprehensive toolkit for FASTA/Q processing. SeqKit provides executable binary files for all major operating systems, including Windows, Linux, and Mac OS X, and can be directly used without any dependencies or pre-configurations. SeqKit demonstrates competitive performance in execution time and memory usage compared to similar tools. The efficiency and usability of SeqKit enable researchers to rapidly accomplish common FASTA/Q file manipulations.
From Debian's description of the seqkit package, under that package's license.
Dependencies
Depends on
libc6
Related apps
- bcftoolsgenomic variant calling and manipulation of VCF/BCF filesCommand line
- bowtie2ultrafast memory-efficient short read alignerCommand line
- bowtieUltrafast memory-efficient short read alignerCommand line
- fastaqFASTA and FASTQ file manipulation toolsCommand line
- bamkittools for common BAM file manipulationsCommand line
- bamtoolstoolkit for manipulating BAM (genome alignment) filesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the seqkit package, under that package's license.
- Description: Debian's description of the seqkit package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.