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chromimpute

Large-scale systematic epigenome imputation

Command lineScience

Install

Not tested on a device yet. What that means

Commands in the package

  • ChromImpute

About chromimpute

From Debian's package description

ChromImpute takes an existing compendium of epigenomic data and uses it to predict signal tracks for mark-sample combinations not experimentally mapped or to generate a potentially more robust version of data sets that have been mapped experimentally. ChromImpute bases its predictions on features from signal tracks of other marks that have been mapped in the target sample and the target mark in other samples with these features combined using an ensemble of regression trees.

From Debian's description of the chromimpute package, under that package's license.

Dependencies

Depends on

  • default-jreorjava7-runtimeorjava8-runtimeorjava9-runtimeorjava10-runtimeorjava11-runtime
  • jarwrapper

Related apps

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Sources and licenses

  • Name: the Debian package name.
  • Summary: Debian's short description of the chromimpute package, under that package's license.
  • Description: Debian's description of the chromimpute package, under that package's license.
  • Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
  • Popularity: Debian Popularity Contest counts.

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