diamond-aligner
accelerated BLAST compatible local sequence aligner
Command lineScience
Not tested on a device yet. What that means
Commands in the package
diamond-alignerdiamond
About diamond-aligner
From Debian's package description
DIAMOND is a sequence aligner for protein and translated DNA searches and functions as a drop-in replacement for the NCBI BLAST software tools. It is suitable for protein-protein search as well as DNA-protein search on short reads and longer sequences including contigs and assemblies, providing a speedup of BLAST ranging up to x20,000.
From Debian's description of the diamond-aligner package, under that package's license.
Dependencies
Depends on
libc6libgcc-s1libstdc++6zlib1g
Recommends
med-config
Related apps
- bioperlPerl tools for computational molecular biologyCommand line
- minimap2versatile pairwise aligner for genomic and spliced nucleotide sequencesCommand line
- laganhighly parametrizable pairwise global genome sequence alignerCommand line
- bbmapBBTools genomic aligner and other tools for short sequencesCommand line
- seergenomic sequence element (kmer) enrichment analysisCommand line
- snap-alignerScalable Nucleotide Alignment ProgramCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the diamond-aligner package, under that package's license.
- Description: Debian's description of the diamond-aligner package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.