dnapi

adapter prediction for small RNA sequencing - utils

Command lineScience

Not tested on a device yet. What that means

Commands in the package

dnapi.py
qual_offset.py
qual_trim.py
to_fasta.py

About dnapi

From Debian's package description

This package provides de novo adapter prediction (iterative) algorithm for small RNA sequencing data.
DNApi can predict most 3' adapters correctly with the default parameters. You can tweak the parameters and can run different prediction modes.

From Debian's description of the dnapi package, under that package's license.

Dependencies

Depends on

python3
python3-dnapilib

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porechopadapter trimmer for Oxford Nanopore readsCommand line
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Sources and licenses

Name: the Debian package name.
Summary: Debian's short description of the dnapi package, under that package's license.
Description: Debian's description of the dnapi package, under that package's license.
Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
Popularity: Debian Popularity Contest counts.