embassy-domainatrix
Extra EMBOSS commands to handle domain classification file
Command lineScience
Not tested on a device yet. What that means
Commands in the package
cathparsedomainnrdomainresodomainseqsdomainssescopparsessematch
About embassy-domainatrix
From Debian's package description
The DOMAINATRIX programs were developed by Jon Ison and colleagues at MRC HGMP for their protein domain research. They are included as an EMBASSY package as a work in progress.
Applications in the current domainatrix release are cathparse (generates DCF file from raw CATH files), domainnr (removes redundant domains from a DCF file), domainreso (removes low resolution domains from a DCF file), domainseqs (adds sequence records to a DCF file), domainsse (adds secondary structure records to a DCF file), scopparse (generates DCF file from raw SCOP files) and ssematch (searches a DCF file for secondary structure matches).
From Debian's description of the embassy-domainatrix package, under that package's license.
Dependencies
Depends on
emboss-liblibc6libx11-6emboss-lib
Recommends
Related apps
- embassy-domalignExtra EMBOSS commands for protein domain alignmentCommand line
- igblastImmunoglobulin and T cell receptor variable domain sequence analysisCommand line
- embassy-domsearchExtra EMBOSS commands to search for protein domainsCommand line
- EMBOSS ExplorerStarts the default web browser on the local EMBOSS Explorer website.
- secrecytool to handle libsecrecy keys and encrypted filesCommand line
- autoclassautomatic classification or clusteringCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the embassy-domainatrix package, under that package's license.
- Description: Debian's description of the embassy-domainatrix package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.