freebayes
Bayesian haplotype-based polymorphism discovery and genotyping
Command lineScience
Not tested on a device yet. What that means
Commands in the package
freebayesbamleftalign
About freebayes
From Debian's package description
FreeBayes is a Bayesian genetic variant detector designed to find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms), indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and complex events (composite insertion and substitution events) smaller than the length of a short-read sequencing alignment.
From Debian's description of the freebayes package, under that package's license.
Dependencies
Depends on
libc6libgcc-s1libseqlib2libstdc++6libtabixpp0t64libvcflib2zlib1gpython3
Recommends
Related apps
- discosnpdiscovering Single Nucleotide Polymorphism from raw set(s) of readsCommand line
- kisspliceDetection of various kinds of polymorphisms in RNA-seq dataCommand line
- thesiasTesting Haplotype Effects In Association StudiesCommand line
- shapeit4fast and accurate method for estimation of haplotypes (phasing)Command line
- dalignerlocal alignment discovery between long nucleotide sequencing readsCommand line
- cutesvcomprehensive discovery of structural variations of genomic sequencesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the freebayes package, under that package's license.
- Description: Debian's description of the freebayes package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
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