mirtop
annotate miRNAs with a standard mirna/isomir naming
Command lineScience
Not tested on a device yet. What that means
Commands in the package
mirtop
About mirtop
From Debian's package description
The main goal of this project is to create a reflection group on metazoan microRNAs (miRNAs), open to all interested researchers, to identify blockages and develop standards and guidelines to improve miRNA research, resources and communication. This can go through the use of standardized file formats, gene and variants nomenclature guidelines, and advancements in miRNA biology understanding. The group will eventually also aim at expanding its breadth to the development of novel tools, data resources, and best-practices guidelines to benefit the scientific community by providing high confidence validated research and analysis strategies, regardless the expertise in this field. This package provides the command line interface to mirtop.
From Debian's description of the mirtop package, under that package's license.
Dependencies
Depends on
python3python3-mirtop
Related apps
- optimirIntegrating genetic variations in miRNA alignmentCommand line
- vcftoolsCollection of tools to work with VCF filesCommand line
- graphlancircular representations of taxonomic and phylogenetic treesCommand line
- cnvkitCopy number variant detection from targeted DNA sequencingCommand line
- cg3Tools for using the 3rd edition of Constraint Grammar (CG-3)Command line
- fastqtlQuantitative Trait Loci (QTL) mapper in cis for molecular phenotypesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the mirtop package, under that package's license.
- Description: Debian's description of the mirtop package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.