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spoa

SIMD partial order alignment tool

Command lineScience

Install

Not tested on a device yet. What that means

Commands in the package

  • spoa

About spoa

From Debian's package description

Spoa (SIMD POA) is a c++ implementation of the partial order alignment (POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which is used to generate consensus sequences (as described in 10.1093/bioinformatics/btg109). It supports three alignment modes: local (Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment (overlap).

From Debian's description of the spoa package, under that package's license.

Dependencies

Depends on

  • libc6
  • libgcc-s1
  • libspoa7.0.0
  • libstdc++6
  • zlib1g

Related apps

All Linux science apps

Sources and licenses

  • Name: the Debian package name.
  • Summary: Debian's short description of the spoa package, under that package's license.
  • Description: Debian's description of the spoa package, under that package's license.
  • Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
  • Popularity: Debian Popularity Contest counts.

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