virulencefinder
identify virulence genes in total or partial sequenced isolates of bacteria
Command lineScience
Not tested on a device yet. What that means
Commands in the package
virulencefinder.py
About virulencefinder
From Debian's package description
The VirulenceFinder service contains one Python script virulencefinder.py which is the script of the latest version of the VirulenceFinder service. VirulenceFinder identifies viruelnce genes in total or partial sequenced isolates of bacteria - at the moment only E. coli, Enterococcus, S. aureus and Listeria are available.
From Debian's description of the virulencefinder package, under that package's license.
Dependencies
Depends on
python3python3python3-tabulatepython3-cgecorencbi-blast+kma
Related apps
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- resfinderidentify acquired antimicrobial resistance genesCommand line
- abpoaadaptive banded Partial Order AlignmentCommand line
- ampliconnoiseremoval of noise from 454 sequenced PCR ampliconsCommand line
- clonalorigininference of homologous recombination in bacteria using whole genome sequencesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the virulencefinder package, under that package's license.
- Description: Debian's description of the virulencefinder package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.