tombo
identification of modified nucleotides from raw nanopore sequencing data
Command lineScience
Not tested on a device yet. What that means
Commands in the package
tombo
About tombo
From Debian's package description
Tombo is a suite of tools primarily for the identification of modified nucleotides from nanopore sequencing data. Tombo also provides tools for the analysis and visualization of raw nanopore signal.
From Debian's description of the tombo package, under that package's license.
Dependencies
Depends on
python3-h5pypython3-mappypython3-numpypython3-packagingpython3-scipypython3-tqdmpython3python3python3-numpy2-abi0orpython3-numpy-abi9python3libc6
Recommends
python3-pyfaidxpython3-rpy2
Related apps
- ea-utilscommand-line tools for processing biological sequencing dataCommand line
- subreadtoolkit for processing next-gen sequencing dataCommand line
- bitseqBayesian Inference of Transcripts from Sequencing DataCommand line
- dazzdbmanage nucleotide sequencing read dataCommand line
- dalignerlocal alignment discovery between long nucleotide sequencing readsCommand line
- poretoolstoolkit for nanopore nucleotide sequencing dataCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the tombo package, under that package's license.
- Description: Debian's description of the tombo package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.