dnarrange
Method to find rearrangements in long DNA reads relative to a genome seq
Command lineScience
Not tested on a device yet. What that means
Commands in the package
dnarrangednarrange-genesdnarrange-linkdnarrange-mergelast-multiplot
About dnarrange
From Debian's package description
This package provides utilities to align the reads to the genome, find rearrangements and draw pictures of rearranged groups
From Debian's description of the dnarrange package, under that package's license.
Dependencies
Depends on
Related apps
- plinkwhole-genome association analysis toolsetCommand line
- gria language for scientific illustrationCommand line
- vcftoolsCollection of tools to work with VCF filesCommand line
- bioperlPerl tools for computational molecular biologyCommand line
- hisat2graph-based alignment of short nucleotide reads to many genomesCommand line
- macsModel-based Analysis of ChIP-Seq on short reads sequencersCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the dnarrange package, under that package's license.
- Description: Debian's description of the dnarrange package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.