Commands in the package
nast-ier
About nast-ier
From Debian's package description
The NAST-iEr alignment utility aligns a single raw nucleotide sequence against one or more NAST formatted sequences.
The alignment algorithm involves global dynamic programming profile alignment to fixed (NAST-formatted) multiply aligned template sequences without any end-gap penalty.
NAST-iEr is part of the microbiomeutil suite.
From Debian's description of the nast-ier package, under that package's license.
Dependencies
Depends on
libc6microbiomeutil-datacdbfasta
Recommends
Related apps
- microbiomeutilMicrobiome Analysis UtilitiesCommand line
- wigeonreimplementation of the Pintail 16S DNA anomaly detection utilityCommand line
- chimeraslayerdetects likely chimeras in PCR amplified DNACommand line
- prankProbabilistic Alignment Kit for DNA, codon and amino-acid sequencesCommand line
- dascrubberalignment-based scrubbing pipeline for DNA sequencing readsCommand line
- pal2nalconverts proteins to genomic DNA alignmentCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the nast-ier package, under that package's license.
- Description: Debian's description of the nast-ier package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
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