norsnet
tool to identify unstructured loops in proteins
Command lineScience
Not tested on a device yet. What that means
Commands in the package
norsnet
About norsnet
From Debian's package description
NORSnet can distinguish between very long contiguous segments with non-regular secondary structure (NORS regions) and well-folded proteins.
NORSnet was trained on predicted information rather than on experimental data. This allows NORSnet to reach into regions in sequence space that are not covered by specialized disorder predictors. One disadvantage of this approach is that it is not optimal for the identification of the "average" disordered region.
NORSnet takes the following input, further described on norsnet(1):
- a protein sequence in a FASTA file
- secondary structure and solvent accessibility prediction by prof(1)
- an HSSP file
- flexible/rigid residues prediction by profbval(1)
From Debian's description of the norsnet package, under that package's license.
Dependencies
Depends on
profnet-norsnet
Recommends
blast2librg-utils-perlprofphdprofbval
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Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the norsnet package, under that package's license.
- Description: Debian's description of the norsnet package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
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