picopore
lossless compression of Nanopore files
Command lineScience
Not tested on a device yet. What that means
Commands in the package
picoporepicopore-realtimepicopore-renamepicopore-test
About picopore
From Debian's package description
The Nanopore is a device to determine the sequences of single moleculres of DNA. No amplification. The output is gigantic and tools like this one help to reduce it.
Over time, other means have substitute the need for this one. Upstream has halted development. Some tutorials and pipelines of the Nanopore still refer to it, though.
From Debian's description of the picopore package, under that package's license.
Dependencies
Depends on
python3python3-picopore
Related apps
- music-binMulti-Simulation Coordinator for MPI -- UtilitiesCommand line
- ismrmrd-toolscommand-line tools for ISMRMRDCommand line
- staden-io-lib-utilsprograms for manipulating DNA sequencing filesCommand line
- reliontoolkit for 3D reconstructions in cryo-electron microscopyCommand line
- ont-fast5-apisimple interface to HDF5 files of the Oxford Nanopore .fast5 file formatCommand line
- qcatdemultiplexing Oxford Nanopore reads from FASTQ filesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the picopore package, under that package's license.
- Description: Debian's description of the picopore package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.