wham-align
Wisconsin's High-Throughput Alignment Method
Command lineScience
Not tested on a device yet. What that means
Commands in the package
whamwham-build
About wham-align
From Debian's package description
This package provides functionality analogous to BWA or bowtie in aligning reads from next-generation DNA sequencing machines against a reference genome.
From Debian's description of the wham-align package, under that package's license.
Dependencies
Depends on
libc6libgcc-s1libstdc++6
Related apps
- FastQC quality controlquality control for high throughput sequence data
- bowtie2ultrafast memory-efficient short read alignerCommand line
- bowtieUltrafast memory-efficient short read alignerCommand line
- hisat2graph-based alignment of short nucleotide reads to many genomesCommand line
- hhsuitesensitive protein sequence searching based on HMM-HMM alignmentCommand line
- cutadaptClean biological sequences from high-throughput sequencing readsCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the wham-align package, under that package's license.
- Description: Debian's description of the wham-align package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
More in About the catalog.