adapterremoval
rapid adapter trimming, identification, and read merging of gene sequences
Command lineScience
Not tested on a device yet. What that means
Commands in the package
AdapterRemoval
About adapterremoval
From Debian's package description
This program searches for and removes remnant adapter sequences from High- Throughput Sequencing (HTS) data and (optionally) trims low quality bases from the 3' end of reads following adapter removal. AdapterRemoval can analyze both single end and paired end data, and can be used to merge overlapping paired-ended reads into (longer) consensus sequences. Additionally, the AdapterRemoval may be used to recover a consensus adapter sequence for paired-ended data, for which this information is not available.
From Debian's description of the adapterremoval package, under that package's license.
Dependencies
Depends on
libbz2-1.0libc6libgcc-s1libstdc++6zlib1g
Related apps
- salmidrapid Kmer based Salmonella identifier from sequence dataCommand line
- trimmomaticflexible read trimming tool for Illumina NGS dataCommand line
- cutadaptClean biological sequences from high-throughput sequencing readsCommand line
- velvetNucleic acid sequence assembler for very short readsCommand line
- metastudentpredictor of Gene Ontology terms from protein sequenceCommand line
- maqmaps short fixed-length polymorphic DNA sequence reads to reference sequencesCommand line
Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the adapterremoval package, under that package's license.
- Description: Debian's description of the adapterremoval package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
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