lumpy-sv
general probabilistic framework for structural variant discovery
Command lineScience
Not tested on a device yet. What that means
Commands in the package
lumpylumpy_filterlumpyexpress
About lumpy-sv
From Debian's package description
LUMPY, a novel SV discovery framework that naturally integrates multiple SV signals jointly across multiple samples. LUMPY yields improved sensitivity, especially when SV signal is reduced owing to either low coverage data or low intra-sample variant allele frequency.
From Debian's description of the lumpy-sv package, under that package's license.
Dependencies
Depends on
libbamtools2.5.2libc6libgcc-s1libgzstream0libhts3t64libstdc++6python3samblastersamtoolspython3python3-pysampython3-numpybamkit
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Sources and licenses
- Name: the Debian package name.
- Summary: Debian's short description of the lumpy-sv package, under that package's license.
- Description: Debian's description of the lumpy-sv package, under that package's license.
- Versions and sizes: Debian's archive for ARM64, as on packages.debian.org.
- Popularity: Debian Popularity Contest counts.
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